[Mesquitelist] Simple question about ordering characters

Wayne Maddison wmaddisn at interchange.ubc.ca
Thu Dec 11 04:33:44 PST 2008


At 9:09 AM +0100 11.12.2008, Michel Laurin wrote:
>Hello,
>
>	Does anybody know how to order all
>characters of a matrix of discrete characters in
>Mesquite? In MacClade, that could be done from a
>list of characters, but the equivalent list in
>Mesquite gives access to probablitiy models (for
>maximum likelihood analysis), but not ordering
>schemes (for parsimony), apparently.

You need to show the column for parsimony models in this List of 
Characters window.  Select Columns>Current Parsimony Models.

Wayne


>The only way
>I have found is to open a tree, trace each
>character, and then choose ordering. This is not
>ideal, especially if there are many characters.
>
>	Sincerely,
>
>	Michel
>--
>Michel Laurin
>CNRS UMR 7179
>Université Paris 6 - Pierre et Marie Curie
>4, place Jussieu
>case 19
>75005 Paris
>FRANCE
>
>tel. (33 1) 44 27 36 92
>http://tolweb.org/notes/?note_id=3669
>_______________________________________________
>Mesquitelist mailing list
>Mesquitelist at mesquiteproject.org
>http://mesquiteproject.org/mailman/listinfo/mesquitelist


-- 
--------------------------------------------------------
Wayne Maddison
  Professor and Canada Research Chair
          Depts. of Zoology and Botany and
          Biodiversity Research Centre
  & Director
          Beaty Biodiversity Museum
  6270 University Boulevard
  University of British Columbia
  Vancouver, BC  V6T 1Z4   Canada

email: wmaddisn at interchange.ubc.ca   FAX: +1 604 822-2416

Mesquite: http://mesquiteproject.org
MacClade: http://macclade.org
Salticidae:  http://salticidae.org
Tree of Life: http://tolweb.org
Beaty Biodiversity Museum: http://beatymuseum.ubc.ca
Home page: http://salticidae.org/wpm/home.html


More information about the Mesquitelist mailing list