PDAP:PDTREE: A translation of the PDTREE module of Garland et al.'s Phenotypic Diversity Analysis Programs

Peter E. Midford, Theodore Garland Jr., and Wayne Maddison

September 2002

News

26 November 2002 - Source (java) is now available on the download page.
The problem with zip files has been corrected.
15 November 2002 - Update with several bug fixes.

How to Download

To download and install this package, do the following:
  1. If you have not already done so, install the most recent version of Mesquite. This may require installing java if your computer does not already have java loaded. To install mesquite, follow the instructions here.
  2. If you have not previously used Mesquite, we recommend spending some time exploring it before loading PDAP:PDTREE. This is because the PDAP:PDTREE module runs inside of Mesquite.
  3. Fill out our questionaire, below, and download the PDAP:PDTREE module.
  4. Uncompress the file to create a folder called PDAP package. This folder will contain two folders, one titled "put in mesquite directory", the other titled "Pdap examples". Within your Mesquite installation there is a folder titled "Mesquite_Folder." Within the "Mesquite_Folder" is a folder called "mesquite". This later folder is where you should move (e.g., drag) the folder called "pdap" which is in the "put in mesquite directory" folder. Do not put the whole "put in mesquite directory" folder into "mesquite".
  5. You can put the Pdap examples folder the examples folder in the "Mesquite_Folder" if you wish, but the examples don't need to be moved anywhere in particular. Within the examples folder are two folders, one containing the guided tour, the other containing several example files and PDI files. To try the tour, open the file called Part1.nex in Mesquite. To import a PDI file, just open the file from the File menu in Mesquite.

We would like to know a little bit about the people that use this package. Except as statistical summaries, this information will remain confidential to the project.

Please fill in the fields below and use the submit button to go to the download page for your platform. Fields named in red can not be left blank.

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Last update of PDAP:PDTREE 15 November 2002
Last update of this page 26 November 2002