Mesquite download

Most parts of Mesquite are not yet thoroughly checked to see that the results are publication-ready. Thus, please do not publish results from this version of Mesquite without consulting the authors. Please see the comments on the page about publishing results.

The basic class libraries and modules of Mesquite are free software, and may be redistributed and modified under the terms of the GNU Lesser General Public License. Source code and developer documentation are available here. The same license may also apply to specialized packages of modules.

THIS SOFTWARE IS PROVIDED "AS IS" WITHOUT WARRANTY OF ANY KIND. WAYNE MADDISON AND DAVID MADDISON DO NOT WARRANT, GUARANTEE, OR MAKE ANY REPRESENTATIONS REGARDING THE USE OR THE RESULTS OF THE SOFTWARE OR DOCUMENTATION IN TERMS OF THEIR CORRECTNESS, RELIABILITY, CURRENTNESS, OR OTHERWISE. IN NO CASE WILL THESE PARTIES BE LIABLE FOR ANY SPECIAL, INCIDENTAL, CONSEQUENTIAL, OR OTHER DAMAGES THAT MAY RESULT FROM USE OF THIS SOFTWARE

Mesquite requires a fairly fast processor and Java 1.1 or higher, and a fair bit of memory.

If you previously downloaded either the base system or specialized packages, and intend to download new or updated packages, you should download new versions of both the base system and whatever specialized packages you want. There have been a few changes to the base system that may make it incompatible with some older versions of packages; likewise, newer packages may be incompatible with older base systems.

Please email Wayne Maddison (wmaddisn@u.arizona.edu) with questions or comments about downloading and installing Mesquite.

There may be addenda or bug fixes since the versions released below. We don't have a sophisticated updating system in place yet; instead you may peruse the directory listing of the various addenda/bug fixes. The ReadMe files will explain the purpose of each addendum/bug fix. CHECK HERE to see the directory listing of addenda and bug fixes.


Base system

The packages here include the base system, including only a portion of the modules being developed. Specialized packages are also available. There are example data files.

Macintosh OS

Windows

UNIX/LINUX


Specialized packages

The packages below can be installed by placing directories in appropriate places in the Mesquite_Folder directory. Follow the installation instructions carefully; if you don't put things in the correct place, Mesquite won't find the files and they won't work.

Below are the specialized packages currently available. Additional packages may appear here in the near future.

Coalescence package (population genetics)

Rhetenor package for morphometrics and multivariate analysis

Genesis package of models of character evolution (simulations, parametric bootstrapping)

PAUP* communication package

Pairwise comparisons package (character correlation)



Copyright © 2001 W. & D. Maddison